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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs74017096 chr15:58282011 A/G ARID3A chr19:925781-975939:+ -0.55 -6.15 1.64E-9 Box Plot
THCA rs7404371 chr16:30340870 C/T NPIPL3 chr16:21413451-21458484:- 0.19 6.14 1.76E-9 Box Plot
THCA rs7404371 chr16:30340870 C/T RUNDC2C chr16:29339874-29418349:+ 0.25 5.96 4.79E-9 Box Plot
THCA rs7410812 chr1:121190330 T/G NBPF14 chr1:148003642-148025863:- 0.42 10 1.68E-21 Box Plot
THCA rs74131213 chr10:51806886 C/T FAM21B chr10:47894023-47949412:+ 0.65 8.37 6.34E-16 Box Plot
THCA rs74131214 chr10:51812445 C/T FAM21B chr10:47894023-47949412:+ 0.67 8.53 1.94E-16 Box Plot
THCA rs7415985 chr1:121279807 T/C NBPF14 chr1:148003642-148025863:- 0.4 9 5.44E-18 Box Plot
THCA rs742090 chr6:26415637 A/C ZNF322B chr9:99957633-99961910:- -0.42 -7.62 1.38E-13 Box Plot
THCA rs7424497 chr2:132237372 T/C TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs7426420 chr3:90276901 T/C STX19 chr3:93733213-93747454:- 0.51 6.95 1.2E-11 Box Plot
THCA rs743357 chr22:23990680 C/T IGLL3 chr22:25713888-25716191:+ 0.71 10.31 1.22E-22 Box Plot
THCA rs74335887 chr3:96788852 G/A PRPF31 chr19:54618790-54635150:+ -0.38 -5.99 4.08E-9 Box Plot
THCA rs7433880 chr3:90174960 C/A STX19 chr3:93733213-93747454:- 0.41 6.09 2.39E-9 Box Plot
THCA rs74339501 chr11:49220042 C/A FOLH1B chr11:89372395-89431886:+ 0.49 7.95 1.38E-14 Box Plot
THCA rs74340001 chr12:94769769 G/A C6orf176 chr6:166337536-166401527:- -0.53 -5.96 4.87E-9 Box Plot